TMEM132C protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TMEM132C

Transmembrane protein 132C. (1037 aa)

Predicted Functional Partners:

FAM20C

0.473

DSCAM

0.471

CACNA2D1

0.460

ENSCAPP00000008880

0.460

FAM20A

0.454

FREM3

0.454

INPP5J

0.446

RYR2

0.439

ERO1B

0.433

FAM20B

0.427

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CACNA2D1	ENSCAPP00000008880	ENSCAPP00000000835	ENSCAPP00000008880	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	annotation not available	0.888
CACNA2D1	FAM20A	ENSCAPP00000000835	ENSCAPP00000007876	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	FAM20A golgi associated secretory pathway pseudokinase.	0.464
CACNA2D1	FREM3	ENSCAPP00000000835	ENSCAPP00000013845	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	FRAS1 related extracellular matrix 3.	0.460
CACNA2D1	RYR2	ENSCAPP00000000835	ENSCAPP00000016675	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	Ryanodine receptor 2.	0.749
CACNA2D1	TMEM132C	ENSCAPP00000000835	ENSCAPP00000003903	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	Transmembrane protein 132C.	0.460
DSCAM	TMEM132C	ENSCAPP00000001268	ENSCAPP00000003903	DS cell adhesion molecule.	Transmembrane protein 132C.	0.471
ENSCAPP00000008880	CACNA2D1	ENSCAPP00000008880	ENSCAPP00000000835	annotation not available	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	0.888
ENSCAPP00000008880	FAM20A	ENSCAPP00000008880	ENSCAPP00000007876	annotation not available	FAM20A golgi associated secretory pathway pseudokinase.	0.464
ENSCAPP00000008880	FREM3	ENSCAPP00000008880	ENSCAPP00000013845	annotation not available	FRAS1 related extracellular matrix 3.	0.460
ENSCAPP00000008880	RYR2	ENSCAPP00000008880	ENSCAPP00000016675	annotation not available	Ryanodine receptor 2.	0.749
ENSCAPP00000008880	TMEM132C	ENSCAPP00000008880	ENSCAPP00000003903	annotation not available	Transmembrane protein 132C.	0.460
ERO1B	TMEM132C	ENSCAPP00000016087	ENSCAPP00000003903	Endoplasmic reticulum oxidoreductase 1 beta.	Transmembrane protein 132C.	0.433
FAM20A	CACNA2D1	ENSCAPP00000007876	ENSCAPP00000000835	FAM20A golgi associated secretory pathway pseudokinase.	Calcium voltage-gated channel auxiliary subunit alpha2delta 1.	0.464
FAM20A	ENSCAPP00000008880	ENSCAPP00000007876	ENSCAPP00000008880	FAM20A golgi associated secretory pathway pseudokinase.	annotation not available	0.464
FAM20A	FAM20C	ENSCAPP00000007876	ENSCAPP00000010498	FAM20A golgi associated secretory pathway pseudokinase.	FAM20C golgi associated secretory pathway kinase.	0.991
FAM20A	TMEM132C	ENSCAPP00000007876	ENSCAPP00000003903	FAM20A golgi associated secretory pathway pseudokinase.	Transmembrane protein 132C.	0.454
FAM20B	FAM20C	ENSCAPP00000017050	ENSCAPP00000010498	FAM20B glycosaminoglycan xylosylkinase.	FAM20C golgi associated secretory pathway kinase.	0.845
FAM20B	TMEM132C	ENSCAPP00000017050	ENSCAPP00000003903	FAM20B glycosaminoglycan xylosylkinase.	Transmembrane protein 132C.	0.427
FAM20C	FAM20A	ENSCAPP00000010498	ENSCAPP00000007876	FAM20C golgi associated secretory pathway kinase.	FAM20A golgi associated secretory pathway pseudokinase.	0.991
FAM20C	FAM20B	ENSCAPP00000010498	ENSCAPP00000017050	FAM20C golgi associated secretory pathway kinase.	FAM20B glycosaminoglycan xylosylkinase.	0.845