Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FCHSD2FCH and double SH3 domains 2. (730 aa)    
Predicted Functional Partners:
ENSCAPP00000007040
annotation not available
    
   0.894
ITSN1
Intersectin 1.
    
 0.873
ENSCAPP00000013032
annotation not available
    
 0.873
ITSN2
Intersectin 2.
   
 0.844
WASL
WASP like actin nucleation promoting factor.
   
 0.821
WAS
WASP actin nucleation promoting factor.
   
 0.821
STAC
SH3 and cysteine rich domain.
    
 0.777
ABCF3
ATP binding cassette subfamily F member 3.
    
   0.731
SYDE1
Synapse defective Rho GTPase homolog 1.
     
 0.678
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.676
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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