Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GMEB2Glucocorticoid modulatory element binding protein 2. (480 aa)    
Predicted Functional Partners:
GMEB1
Glucocorticoid modulatory element binding protein 1.
   
   0.961
SDC1
Syndecan 1.
    
 
 0.928
ENSCAPP00000009388
annotation not available
    
   0.833
NELFB
Negative elongation factor complex member B.
   
  
 0.757
D2HGDH
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.722
RHBDF1
Rhomboid 5 homolog 1.
      
 0.683
C2orf80
Chromosome 2 open reading frame 80.
      
 0.683
ARRDC3
Arrestin domain containing 3.
      
 0.667
ENSCAPP00000015353
annotation not available
      
 0.663
ENSCAPP00000018643
annotation not available
      
 0.658
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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