Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NTHL1Nth like DNA glycosylase 1. (211 aa)    
Predicted Functional Partners:
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
  
 0.965
ENSCAPP00000005260
annotation not available
  
 0.927
MLH1
mutL homolog 1.
  
 
 0.891
ENSCAPP00000000297
annotation not available
      
 0.887
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 
 0.886
NEIL2
Nei like DNA glycosylase 2.
      
 0.878
OGG1
8-oxoguanine DNA glycosylase.
   
 
 0.877
ENSCAPP00000003173
annotation not available
   
 0.846
ENSCAPP00000012091
annotation not available
    
 0.838
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
   
 
 0.761
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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