Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A1Solute carrier family 4 member 1 (Diego blood group). (827 aa)    
Predicted Functional Partners:
EPB42
Erythrocyte membrane protein band 4.2.
   
 0.999
ANK1
Ankyrin 1.
   
 0.997
RHAG
Rh associated glycoprotein.
   
 0.991
ENSCAPP00000014130
annotation not available
   
 0.986
ENSCAPP00000006881
annotation not available
   
 
 0.973
ENSCAPP00000012804
annotation not available
   
 0.941
ENSCAPP00000018021
annotation not available
   
  
 0.932
SLC26A7
Solute carrier family 26 member 7.
     
 0.924
SYK
Spleen associated tyrosine kinase.
    
 0.855
SPTB
Spectrin beta, erythrocytic.
   
 
 0.831
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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