Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJA1Gap junction protein alpha 1. (382 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.998
ENSCAPP00000011344
annotation not available
    
 0.994
GJC1
Gap junction protein gamma 1.
    
  0.991
GJD2
Gap junction protein delta 2.
    
  0.991
MAPK3
Mitogen-activated protein kinase 3.
    
 0.985
GJA5
Gap junction protein alpha 5.
   
 0.966
MAPK7
Mitogen-activated protein kinase 7.
    
 0.964
GJB6
Gap junction protein beta 6.
    
 0.962
UBQLN4
Ubiquilin 4.
    
 
 0.960
GJB3
Gap junction protein beta 3.
    
  0.956
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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