STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAP5Cytoskeleton associated protein 5. (1692 aa)    
Predicted Functional Partners:
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.991
ENSCAPP00000006638
annotation not available
   
 0.987
KIF18A
Kinesin family member 18A.
   
 0.983
NDC80
NDC80 kinetochore complex component.
   
 0.979
PLK1
Polo like kinase 1.
   
 0.978
CLASP1
Cytoplasmic linker associated protein 1.
   
 0.977
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.976
ENSCAPP00000012202
annotation not available
    
 
 0.973
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.968
ENSCAPP00000004766
annotation not available
    
 0.964
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.