ENSCAPP00000003934 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

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[Homology]

Score

ENSCAPP00000003934

annotation not available (133 aa)

Predicted Functional Partners:

MKLN1

0.998

WDR26

0.998

GID8

0.997

RMND5A

0.995

ENSCAPP00000017829

0.990

ENSCAPP00000002740

0.989

MAEA

0.987

YPEL5

0.982

RANBP10

0.978

RMND5B

0.953

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000002740	ENSCAPP00000003934	ENSCAPP00000002740	ENSCAPP00000003934	annotation not available	annotation not available	0.989
ENSCAPP00000002740	ENSCAPP00000017829	ENSCAPP00000002740	ENSCAPP00000017829	annotation not available	annotation not available	0.998
ENSCAPP00000002740	GID8	ENSCAPP00000002740	ENSCAPP00000014972	annotation not available	GID complex subunit 8 homolog.	0.999
ENSCAPP00000002740	MAEA	ENSCAPP00000002740	ENSCAPP00000013544	annotation not available	Macrophage erythroblast attacher.	0.996
ENSCAPP00000002740	MKLN1	ENSCAPP00000002740	ENSCAPP00000003135	annotation not available	Muskelin 1.	0.963
ENSCAPP00000002740	RANBP10	ENSCAPP00000002740	ENSCAPP00000003571	annotation not available	RAN binding protein 10.	0.993
ENSCAPP00000002740	RMND5A	ENSCAPP00000002740	ENSCAPP00000015914	annotation not available	Required for meiotic nuclear division 5 homolog A.	0.998
ENSCAPP00000002740	RMND5B	ENSCAPP00000002740	ENSCAPP00000009675	annotation not available	Required for meiotic nuclear division 5 homolog B.	0.996
ENSCAPP00000002740	WDR26	ENSCAPP00000002740	ENSCAPP00000006995	annotation not available	WD repeat domain 26.	0.999
ENSCAPP00000002740	YPEL5	ENSCAPP00000002740	ENSCAPP00000014406	annotation not available	Yippee like 5.	0.534
ENSCAPP00000003934	ENSCAPP00000002740	ENSCAPP00000003934	ENSCAPP00000002740	annotation not available	annotation not available	0.989
ENSCAPP00000003934	ENSCAPP00000017829	ENSCAPP00000003934	ENSCAPP00000017829	annotation not available	annotation not available	0.990
ENSCAPP00000003934	GID8	ENSCAPP00000003934	ENSCAPP00000014972	annotation not available	GID complex subunit 8 homolog.	0.997
ENSCAPP00000003934	MAEA	ENSCAPP00000003934	ENSCAPP00000013544	annotation not available	Macrophage erythroblast attacher.	0.987
ENSCAPP00000003934	MKLN1	ENSCAPP00000003934	ENSCAPP00000003135	annotation not available	Muskelin 1.	0.998
ENSCAPP00000003934	RANBP10	ENSCAPP00000003934	ENSCAPP00000003571	annotation not available	RAN binding protein 10.	0.978
ENSCAPP00000003934	RMND5A	ENSCAPP00000003934	ENSCAPP00000015914	annotation not available	Required for meiotic nuclear division 5 homolog A.	0.995
ENSCAPP00000003934	RMND5B	ENSCAPP00000003934	ENSCAPP00000009675	annotation not available	Required for meiotic nuclear division 5 homolog B.	0.953
ENSCAPP00000003934	WDR26	ENSCAPP00000003934	ENSCAPP00000006995	annotation not available	WD repeat domain 26.	0.998
ENSCAPP00000003934	YPEL5	ENSCAPP00000003934	ENSCAPP00000014406	annotation not available	Yippee like 5.	0.982