Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRM1Cholinergic receptor muscarinic 1. (460 aa)    
Predicted Functional Partners:
ENSCAPP00000008113
annotation not available
    
  0.941
GNG12
G protein subunit gamma 12.
    
  0.877
GNAI3
G protein subunit alpha i3.
    
 0.873
GNAQ
G protein subunit alpha q.
    
 0.869
GNA11
G protein subunit alpha 11.
    
 0.869
LPAR1
Lysophosphatidic acid receptor 1.
     
 0.869
ENSCAPP00000011373
annotation not available
    
 0.869
CHRM3
Cholinergic receptor muscarinic 3.
   
 
  0.867
ENSCAPP00000006458
annotation not available
    
 0.866
LPAR3
Lysophosphatidic acid receptor 3.
     
 0.864
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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