STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFFBDNA fragmentation factor subunit beta. (256 aa)    
Predicted Functional Partners:
DFFA
DNA fragmentation factor subunit alpha.
    
 0.990
ENSCAPP00000008032
annotation not available
    
 0.875
CASP14
Caspase 14.
    
 0.768
ENSCAPP00000004580
annotation not available
    
 0.717
CFLAR
CASP8 and FADD like apoptosis regulator.
    
 0.680
CASP6
Caspase 6.
    
 0.679
ENSCAPP00000010406
annotation not available
    
 0.655
CASP9
Caspase 9.
    
 0.646
CIDEB
Cell death inducing DFFA like effector b.
    
 
 0.625
CASP2
Caspase 2.
    
 0.612
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.