STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFFBDNA fragmentation factor subunit beta. (256 aa)    
Predicted Functional Partners:
DFFA
DNA fragmentation factor subunit alpha.
    
 0.999
ENSCAPP00000008032
annotation not available
    
 0.987
MAGOHB
Mago homolog B, exon junction complex subunit.
    
   0.841
MAGOH
Mago homolog, exon junction complex subunit.
    
   0.841
ENSCAPP00000004580
annotation not available
    
 0.830
CASP14
Caspase 14.
    
 0.783
CFLAR
CASP8 and FADD like apoptosis regulator.
    
 0.776
CASP6
Caspase 6.
    
 0.746
CIDEB
Cell death inducing DFFA like effector b.
    
 
 0.706
CXADR
CXADR Ig-like cell adhesion molecule.
    
 0.703
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.