Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003941annotation not available (128 aa)    
Predicted Functional Partners:
WAS
WASP actin nucleation promoting factor.
   
   0.715
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
   
    0.675
TBL3
Transducin beta like 3.
    
   0.642
STK32A
Serine/threonine kinase 32A.
      
 0.623
PLD5
Phospholipase D family member 5.
   
  
 0.583
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
      
 0.570
DENND1A
DENN domain containing 1A.
   
  
 0.532
RAC1
Rac family small GTPase 1.
   
 0.517
RAC2
Rac family small GTPase 2.
   
 0.517
RAC3
Rac family small GTPase 3.
   
 0.517
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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