STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRAProtein activator of interferon induced protein kinase EIF2AK2. (201 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.996
TARBP2
TARBP2 subunit of RISC loading complex.
  
 
0.990
ENSCAPP00000015731
annotation not available
    
 0.977
AGO2
Argonaute RISC catalytic component 2.
    
 0.976
AGO3
Argonaute RISC catalytic component 3.
    
 0.958
AGO1
Argonaute RISC component 1.
    
 0.956
DGCR8
DGCR8 microprocessor complex subunit.
    
 0.954
AGO4
Argonaute RISC component 4.
    
 0.953
DHX9
DExH-box helicase 9.
    
 0.950
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.941
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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