Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003951annotation not available (106 aa)    
Predicted Functional Partners:
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.804
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.794
COPB1
Coatomer protein complex subunit beta 1.
   
 0.783
COPG1
Coatomer protein complex subunit gamma 1.
    
 0.780
COPB2
Coatomer protein complex subunit beta 2.
   
 0.773
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
 0.771
ENSCAPP00000004998
annotation not available
    
 0.755
COPA
Coatomer protein complex subunit alpha.
    
 0.745
ENSCAPP00000003292
annotation not available
    
 0.723
ARCN1
Archain 1.
   
 0.719
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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