STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GGA3Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (701 aa)    
Predicted Functional Partners:
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.978
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
  
 
0.960
M6PR
Mannose-6-phosphate receptor, cation dependent.
    
 
 0.958
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.955
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
  
 
0.911
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.785
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.759
ENSCAPP00000010366
annotation not available
    
   0.759
ENSCAPP00000000492
annotation not available
    
   0.744
ENSCAPP00000004155
annotation not available
    
   0.744
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.