STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF4Yip1 domain family member 4. (132 aa)    
Predicted Functional Partners:
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
    
 
 0.885
VCP
Valosin containing protein.
    
 0.830
YIPF3
Yip1 domain family member 3.
    
 
 0.792
YIPF2
Yip1 domain family member 2.
    
 
 0.781
YIPF1
Yip1 domain family member 1.
    
 
 0.778
APOB
Apolipoprotein B.
    
  0.693
ENSCAPP00000009303
annotation not available
    
  0.652
DERL1
Derlin 1.
   
 0.650
DERL2
Derlin 2.
   
 0.650
ENSCAPP00000017700
annotation not available
   
 0.650
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.