Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003958annotation not available (136 aa)    
Predicted Functional Partners:
RYR1
Ryanodine receptor 1.
   
 0.948
ENSCAPP00000011428
annotation not available
   
 0.939
RYR2
Ryanodine receptor 2.
   
 0.929
MYBPC1
Myosin binding protein C, slow type.
   
 0.913
RYR3
Ryanodine receptor 3.
   
 0.900
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 
 0.893
ENSCAPP00000009412
annotation not available
 
      0.891
CASQ2
Calsequestrin 2.
   
 
  0.870
MYOT
Myotilin.
   
 
 0.860
TNNI2
Troponin I2, fast skeletal type.
   
 
 0.858
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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