Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DESI2Desumoylating isopeptidase 2. (178 aa)    
Predicted Functional Partners:
METTL14
Methyltransferase like 14.
   
 0.923
METTL3
Methyltransferase like 3.
   
 0.856
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
   0.750
PSMC2
Proteasome 26S subunit, ATPase 2.
    
   0.691
ENSCAPP00000004144
annotation not available
    
   0.691
PSMC4
Proteasome 26S subunit, ATPase 4.
    
   0.691
PSMA4
Proteasome 20S subunit alpha 4.
    
   0.691
PSMB1
Proteasome 20S subunit beta 1.
    
   0.691
PSMA6
Proteasome 20S subunit alpha 6.
    
   0.691
PSMA1
Proteasome 20S subunit alpha 1.
    
   0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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