STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003972annotation not available (140 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.920
CUL1
Cullin 1.
    
 0.829
COPS4
COP9 signalosome subunit 4.
    
  0.735
COPS2
COP9 signalosome subunit 2.
    
  0.695
CUL3
Cullin 3.
    
 0.674
RBX1
Ring-box 1.
    
 0.673
SARS1
seryl-tRNA synthetase 1.
 
  
  0.666
CACUL1
CDK2 associated cullin domain 1.
    
 0.626
COPS7B
COP9 signalosome subunit 7B.
    
  0.611
COPS6
COP9 signalosome subunit 6.
    
  0.611
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.