Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003972annotation not available (140 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.968
COPS4
COP9 signalosome subunit 4.
    
  0.955
COPS2
COP9 signalosome subunit 2.
    
  0.954
COPS7B
COP9 signalosome subunit 7B.
    
  0.952
COPS6
COP9 signalosome subunit 6.
    
  0.941
SKP1
S-phase kinase associated protein 1.
    
 0.938
COPS3
COP9 signalosome subunit 3.
    
 0.931
RBX1
Ring-box 1.
    
 0.925
FBXW2
F-box and WD repeat domain containing 2.
    
 0.887
GPS1
G protein pathway suppressor 1.
    
  0.828
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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