STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003974annotation not available (366 aa)    
Predicted Functional Partners:
ENSCAPP00000000272
annotation not available
      
 0.842
DYNLL2
Dynein light chain LC8-type 2.
    
   0.776
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.745
ENSCAPP00000010607
annotation not available
      
 0.690
MSH4
mutS homolog 4.
      
 0.623
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.599
RTF2
Replication termination factor 2.
      
 0.570
ROPN1L
Rhophilin associated tail protein 1 like.
      
 0.536
ENSCAPP00000009010
annotation not available
    
   0.505
TULP3
TUB like protein 3.
      
 0.482
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.