STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM44Tripartite motif containing 44. (281 aa)    
Predicted Functional Partners:
TRIM10
Tripartite motif containing 10.
    
 0.953
TRIM17
Tripartite motif containing 17.
    
 0.866
TRIM62
Tripartite motif containing 62.
    
 0.801
FLNA
Filamin A.
    
   0.785
TRIM66
Tripartite motif containing 66.
    
 0.734
TRIM11
Tripartite motif containing 11.
    
 0.730
TRIM3
Tripartite motif containing 3.
    
 0.726
IARS2
isoleucyl-tRNA synthetase 2, mitochondrial.
    
 
 0.707
TRIM35
Tripartite motif containing 35.
    
 0.706
TRIM9
Tripartite motif containing 9.
    
 
 0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.