Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD51RAD51 recombinase. (246 aa)    
Predicted Functional Partners:
ENSCAPP00000013163
annotation not available
   
 0.999
BARD1
BRCA1 associated RING domain 1.
  
 0.998
RAD52
RAD52 homolog, DNA repair protein.
    
 0.998
ENSCAPP00000014899
annotation not available
   
 0.997
XRCC3
X-ray repair cross complementing 3.
  
 
0.997
ENSCAPP00000016271
annotation not available
  
 0.996
ATM
ATM serine/threonine kinase.
    
 0.995
BLM
BLM RecQ like helicase.
  
 0.995
RPA1
Replication protein A1.
  
 0.994
BABAM2
BRISC and BRCA1 A complex member 2.
    
 0.993
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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