Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPGCapping actin protein, gelsolin like. (351 aa)    
Predicted Functional Partners:
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
  0.849
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
     
  0.849
SCIN
Scinderin.
     
  0.849
ENSCAPP00000017241
annotation not available
    
 
 0.847
COG6
Component of oligomeric golgi complex 6.
   
 0.818
RBM18
RNA binding motif protein 18.
    
   0.816
ENSCAPP00000017221
annotation not available
    
 0.814
COG3
Component of oligomeric golgi complex 3.
    
 0.811
ENSCAPP00000008032
annotation not available
    
 0.810
COG4
Component of oligomeric golgi complex 4.
    
 0.800
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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