STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENOOSelenoprotein O. (490 aa)    
Predicted Functional Partners:
ENSCAPP00000002641
annotation not available
   
    0.673
ENSCAPP00000010667
annotation not available
   
    0.673
ENSCAPP00000010350
annotation not available
    
  0.624
MSRB1
Methionine sulfoxide reductase B1.
  
  
 0.615
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
  
 0.590
SELENOS
Selenoprotein S.
      
 0.578
SELENOT
Selenoprotein T.
      
 0.570
ENSCAPP00000018197
annotation not available
      
 0.562
SELENOI
Selenoprotein I.
      
 0.551
ENSCAPP00000011681
annotation not available
      
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.