STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A13Solute carrier family 6 member 13. (496 aa)    
Predicted Functional Partners:
SLC6A12
Solute carrier family 6 member 12.
   
 
  0.874
SLC6A1
Solute carrier family 6 member 1.
   
 
  0.870
SLC6A11
Solute carrier family 6 member 11.
     
  0.859
CRTC3
CREB regulated transcription coactivator 3.
      
 0.536
SLC1A7
Solute carrier family 1 member 7.
    
 0.517
SLC6A7
Solute carrier family 6 member 7.
   
 
  0.511
SLC6A9
Solute carrier family 6 member 9.
   
 
  0.509
ENSCAPP00000005674
annotation not available
   
 
  0.504
SLC13A3
Solute carrier family 13 member 3.
  
  
 0.495
IRAK1
Interleukin 1 receptor associated kinase 1.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.