STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QTRT1Queuine tRNA-ribosyltransferase catalytic subunit 1. (309 aa)    
Predicted Functional Partners:
QTRT2
Queuine tRNA-ribosyltransferase accessory subunit 2.
  
0.991
PTS
6-pyruvoyltetrahydropterin synthase.
    
 0.739
MTHFD2
annotation not available
  
 
 0.716
ENSCAPP00000008979
annotation not available
    
  0.644
PSMD12
Proteasome 26S subunit, non-ATPase 12.
 
      0.644
NT5E
5'-nucleotidase ecto.
  
 
  0.630
FKBP8
FKBP prolyl isomerase 8.
    
  0.626
TRUB1
TruB pseudouridine synthase family member 1.
  
  
 0.614
METTL1
Methyltransferase like 1.
  
  
 0.605
TRMT2A
tRNA methyltransferase 2 homolog A.
  
  
 0.592
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.