STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPS1Transcriptional repressor GATA binding 1. (1281 aa)    
Predicted Functional Partners:
ENSCAPP00000000270
annotation not available
   
 0.883
ENSCAPP00000013350
annotation not available
   
 0.883
ENSCAPP00000006586
annotation not available
   
 0.881
SRF
Serum response factor.
    
 0.742
FOXA3
Forkhead box A3.
    
 0.736
CREBBP
CREB binding protein.
    
 0.651
EP300
E1A binding protein p300.
    
 0.651
NFYB
Nuclear transcription factor Y subunit beta.
    
 
 0.647
ENSCAPP00000002314
annotation not available
    
 0.642
HDAC5
Histone deacetylase 5.
    
 0.641
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.