STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB6Integrin subunit beta 6. (758 aa)    
Predicted Functional Partners:
ITGAV
Integrin subunit alpha V.
   
 0.997
TLN1
Talin 1.
   
 0.974
ITGA5
Integrin subunit alpha 5.
   
 0.972
ITGA3
Integrin subunit alpha 3.
   
 0.968
ITGA2B
Integrin subunit alpha 2b.
   
 0.968
ITGA8
Integrin subunit alpha 8.
   
 0.968
ITGA1
Integrin subunit alpha 1.
   
 0.964
ENSCAPP00000016591
annotation not available
   
 0.964
ITGA6
Integrin subunit alpha 6.
   
 0.962
ITGA4
Integrin subunit alpha 4.
   
 0.962
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.