STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP7Sp7 transcription factor. (428 aa)    
Predicted Functional Partners:
RUNX2
RUNX family transcription factor 2.
    
 0.659
WDR92
WD repeat domain 92.
    
 0.637
COL1A2
Collagen type I alpha 2 chain.
    
 0.616
TG
Thyroglobulin.
    
 
 0.616
ENSCAPP00000016172
annotation not available
    
 0.616
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.562
SUFU
SUFU negative regulator of hedgehog signaling.
   
 0.561
NFATC1
Nuclear factor of activated T cells 1.
      
 0.557
KDM6B
Lysine demethylase 6B.
    
 0.552
MRPS10
Mitochondrial ribosomal protein S10.
   
  0.544
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.