Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SP7Sp7 transcription factor. (428 aa)    
Predicted Functional Partners:
RUNX2
RUNX family transcription factor 2.
    
 0.856
WDR92
WD repeat domain 92.
    
 
 0.712
IBSP
Integrin binding sialoprotein.
    
 
 0.703
NCOA1
Nuclear receptor coactivator 1.
    
 0.697
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
     
 0.693
SPP1
Secreted phosphoprotein 1.
    
 
 0.663
SERPINF1
Serpin family F member 1.
    
 
 0.655
BGLAP
Bone gamma-carboxyglutamate protein.
    
 
 0.646
ENSCAPP00000016172
annotation not available
    
 0.638
ENSCAPP00000000033
annotation not available
    
 0.632
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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