Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1RLComplement C1r subcomponent like. (347 aa)    
Predicted Functional Partners:
C1S
Complement C1s.
   
 0.997
SERPING1
Serpin family G member 1.
  
 0.982
C1QC
Complement C1q C chain.
   
 0.966
C1QA
Complement C1q A chain.
   
 0.956
ENSCAPP00000018120
annotation not available
   
 0.928
MBL2
Mannose binding lectin 2.
   
 0.927
C1QB
Complement C1q B chain.
   
 0.910
C1R
Complement C1r.
   
  0.885
ENSCAPP00000015054
annotation not available
   
 0.812
C2
Complement C2.
   
 0.812
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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