Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GNL1G protein nucleolar 1 (putative). (551 aa)    
Predicted Functional Partners:
GTPBP4
GTP binding protein 4.
   
 0.972
NMD3
NMD3 ribosome export adaptor.
   
 
 0.963
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
    
   0.959
ENSCAPP00000001460
annotation not available
   
 0.942
ENSCAPP00000018144
annotation not available
   
 0.935
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.923
RRP1
Ribosomal RNA processing 1.
   
 0.921
RPF2
Ribosome production factor 2 homolog.
   
 0.920
NOC3L
NOC3 like DNA replication regulator.
   
 0.912
ENSCAPP00000010582
annotation not available
   
 0.910
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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