GNL1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GNL1

G protein nucleolar 1 (putative). (551 aa)

Predicted Functional Partners:

GTPBP4

0.981

ENSCAPP00000001460

0.978

NMD3

0.978

NOC2L

0.974

BOP1

0.969

NOC3L

0.961

ENSCAPP00000018144

0.960

BRIX1

0.957

ENSCAPP00000011601

0.956

ENSCAPP00000010582

0.952

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BOP1	BRIX1	ENSCAPP00000002700	ENSCAPP00000007984	BOP1 ribosomal biogenesis factor.	Biogenesis of ribosomes BRX1.	0.999
BOP1	ENSCAPP00000001460	ENSCAPP00000002700	ENSCAPP00000001460	BOP1 ribosomal biogenesis factor.	annotation not available	0.999
BOP1	ENSCAPP00000010582	ENSCAPP00000002700	ENSCAPP00000010582	BOP1 ribosomal biogenesis factor.	annotation not available	0.999
BOP1	ENSCAPP00000011601	ENSCAPP00000002700	ENSCAPP00000011601	BOP1 ribosomal biogenesis factor.	annotation not available	0.998
BOP1	ENSCAPP00000018144	ENSCAPP00000002700	ENSCAPP00000018144	BOP1 ribosomal biogenesis factor.	annotation not available	0.995
BOP1	GNL1	ENSCAPP00000002700	ENSCAPP00000004051	BOP1 ribosomal biogenesis factor.	G protein nucleolar 1 (putative).	0.969
BOP1	GTPBP4	ENSCAPP00000002700	ENSCAPP00000001224	BOP1 ribosomal biogenesis factor.	GTP binding protein 4.	0.999
BOP1	NMD3	ENSCAPP00000002700	ENSCAPP00000018478	BOP1 ribosomal biogenesis factor.	NMD3 ribosome export adaptor.	0.910
BOP1	NOC2L	ENSCAPP00000002700	ENSCAPP00000004318	BOP1 ribosomal biogenesis factor.	NOC2 like nucleolar associated transcriptional repressor.	0.999
BOP1	NOC3L	ENSCAPP00000002700	ENSCAPP00000006072	BOP1 ribosomal biogenesis factor.	NOC3 like DNA replication regulator.	0.999
BRIX1	BOP1	ENSCAPP00000007984	ENSCAPP00000002700	Biogenesis of ribosomes BRX1.	BOP1 ribosomal biogenesis factor.	0.999
BRIX1	ENSCAPP00000001460	ENSCAPP00000007984	ENSCAPP00000001460	Biogenesis of ribosomes BRX1.	annotation not available	0.999
BRIX1	ENSCAPP00000010582	ENSCAPP00000007984	ENSCAPP00000010582	Biogenesis of ribosomes BRX1.	annotation not available	0.999
BRIX1	ENSCAPP00000011601	ENSCAPP00000007984	ENSCAPP00000011601	Biogenesis of ribosomes BRX1.	annotation not available	0.999
BRIX1	ENSCAPP00000018144	ENSCAPP00000007984	ENSCAPP00000018144	Biogenesis of ribosomes BRX1.	annotation not available	0.992
BRIX1	GNL1	ENSCAPP00000007984	ENSCAPP00000004051	Biogenesis of ribosomes BRX1.	G protein nucleolar 1 (putative).	0.957
BRIX1	GTPBP4	ENSCAPP00000007984	ENSCAPP00000001224	Biogenesis of ribosomes BRX1.	GTP binding protein 4.	0.999
BRIX1	NMD3	ENSCAPP00000007984	ENSCAPP00000018478	Biogenesis of ribosomes BRX1.	NMD3 ribosome export adaptor.	0.796
BRIX1	NOC2L	ENSCAPP00000007984	ENSCAPP00000004318	Biogenesis of ribosomes BRX1.	NOC2 like nucleolar associated transcriptional repressor.	0.999
BRIX1	NOC3L	ENSCAPP00000007984	ENSCAPP00000006072	Biogenesis of ribosomes BRX1.	NOC3 like DNA replication regulator.	0.999