STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004060annotation not available (85 aa)    
Predicted Functional Partners:
SPTBN1
Spectrin beta, non-erythrocytic 1.
   
 0.948
ENSCAPP00000000271
annotation not available
   
 0.875
ENSCAPP00000015927
annotation not available
   
 0.875
ENSCAPP00000009388
annotation not available
     
 0.862
NFASC
Neurofascin.
    
 0.856
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.848
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.848
TIAM1
TIAM Rac1 associated GEF 1.
    
 0.829
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.826
L1CAM
L1 cell adhesion molecule.
    
 0.819
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.