Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004061annotation not available (424 aa)    
Predicted Functional Partners:
TBCB
Tubulin folding cofactor B.
      
 0.759
TBCA
Tubulin folding cofactor A.
      
 0.757
ENSCAPP00000012685
annotation not available
      
 0.752
ENSCAPP00000014011
annotation not available
      
 0.746
TBCD
Tubulin folding cofactor D.
      
 0.665
TECTA
Tectorin alpha.
 
    
 0.657
TSPAN17
Tetraspanin 17.
      
 0.578
ENSCAPP00000011460
annotation not available
      
 0.570
RHPN2
Rhophilin Rho GTPase binding protein 2.
      
 0.569
ENSCAPP00000009455
annotation not available
      
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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