STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYSM1Myb like, SWIRM and MPN domains 1. (654 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
 0.999
ENSCAPP00000004781
annotation not available
   
 0.999
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.998
MACROH2A2
macroH2A.2 histone.
  
 0.998
MACROH2A1
macroH2A.1 histone.
  
 0.998
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 0.998
ENSCAPP00000001550
annotation not available
    
 0.997
ACTL6A
Actin like 6A.
   
 0.997
ENSCAPP00000000256
annotation not available
    
 0.996
PLEKHA2
Pleckstrin homology domain containing A2.
    
 0.996
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.