STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004069annotation not available (80 aa)    
Predicted Functional Partners:
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
   
 
 0.825
ENSCAPP00000006530
annotation not available
   
 
 0.817
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
   
 
 0.817
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
   
 
 0.816
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 
  0.815
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
     
 0.814
CACNA1E
Calcium voltage-gated channel subunit alpha1 E.
     
 0.804
CACNG6
Calcium voltage-gated channel auxiliary subunit gamma 6.
   
 
  0.795
CACNA1B
Calcium voltage-gated channel subunit alpha1 B.
     
 0.604
CACNA1A
Calcium voltage-gated channel subunit alpha1 A.
     
 0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.