STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004076annotation not available (80 aa)    
Predicted Functional Partners:
NOS2
Nitric oxide synthase 2.
 
  
  0.979
NOS3
Nitric oxide synthase 3.
 
   
  0.972
NOS1AP
Nitric oxide synthase 1 adaptor protein.
    
 0.967
CALML3
Calmodulin like 3.
    
 0.954
SNTA1
Syntrophin alpha 1.
    
 
 0.952
ENSCAPP00000017763
annotation not available
    
 0.931
ENSCAPP00000008628
annotation not available
    
 0.913
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
    
 0.908
FLAD1
Flavin adenine dinucleotide synthetase 1.
  
 
 0.896
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
 0.892
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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