STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004078annotation not available (500 aa)    
Predicted Functional Partners:
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.978
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.976
ENSCAPP00000010045
annotation not available
  
 
 0.974
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 0.965
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.964
ENSCAPP00000006781
annotation not available
  
 
 0.957
CS
Citrate synthase.
  
 0.957
FDXR
Ferredoxin reductase.
  
 0.956
FADS6
Fatty acid desaturase 6.
  
 0.956
GLUL
Glutamate-ammonia ligase.
  
 
 0.947
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.