BACH1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BACH1

BTB domain and CNC homolog 1. (740 aa)

Predicted Functional Partners:

MAFK

0.998

ENSCAPP00000001389

0.996

ENSCAPP00000003757

0.985

MAFG

0.981

ENSCAPP00000018593

0.961

ENSCAPP00000004587

0.960

APBB3

0.959

ENSCAPP00000004857

0.959

ENSCAPP00000003806

0.958

RBX1

0.958

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBB3	BACH1	ENSCAPP00000002234	ENSCAPP00000004087	Amyloid beta precursor protein binding family B member 3.	BTB domain and CNC homolog 1.	0.959
APBB3	ENSCAPP00000003757	ENSCAPP00000002234	ENSCAPP00000003757	Amyloid beta precursor protein binding family B member 3.	annotation not available	0.449
APBB3	ENSCAPP00000003806	ENSCAPP00000002234	ENSCAPP00000003806	Amyloid beta precursor protein binding family B member 3.	annotation not available	0.456
BACH1	APBB3	ENSCAPP00000004087	ENSCAPP00000002234	BTB domain and CNC homolog 1.	Amyloid beta precursor protein binding family B member 3.	0.959
BACH1	ENSCAPP00000001389	ENSCAPP00000004087	ENSCAPP00000001389	BTB domain and CNC homolog 1.	annotation not available	0.996
BACH1	ENSCAPP00000003757	ENSCAPP00000004087	ENSCAPP00000003757	BTB domain and CNC homolog 1.	annotation not available	0.985
BACH1	ENSCAPP00000003806	ENSCAPP00000004087	ENSCAPP00000003806	BTB domain and CNC homolog 1.	annotation not available	0.958
BACH1	ENSCAPP00000004587	ENSCAPP00000004087	ENSCAPP00000004587	BTB domain and CNC homolog 1.	annotation not available	0.960
BACH1	ENSCAPP00000004857	ENSCAPP00000004087	ENSCAPP00000004857	BTB domain and CNC homolog 1.	annotation not available	0.959
BACH1	ENSCAPP00000018593	ENSCAPP00000004087	ENSCAPP00000018593	BTB domain and CNC homolog 1.	annotation not available	0.961
BACH1	MAFG	ENSCAPP00000004087	ENSCAPP00000008868	BTB domain and CNC homolog 1.	MAF bZIP transcription factor G.	0.981
BACH1	MAFK	ENSCAPP00000004087	ENSCAPP00000016705	BTB domain and CNC homolog 1.	MAF bZIP transcription factor K.	0.998
BACH1	RBX1	ENSCAPP00000004087	ENSCAPP00000006025	BTB domain and CNC homolog 1.	Ring-box 1.	0.958
ENSCAPP00000001389	BACH1	ENSCAPP00000001389	ENSCAPP00000004087	annotation not available	BTB domain and CNC homolog 1.	0.996
ENSCAPP00000001389	ENSCAPP00000003806	ENSCAPP00000001389	ENSCAPP00000003806	annotation not available	annotation not available	0.942
ENSCAPP00000001389	MAFK	ENSCAPP00000001389	ENSCAPP00000016705	annotation not available	MAF bZIP transcription factor K.	0.431
ENSCAPP00000001389	RBX1	ENSCAPP00000001389	ENSCAPP00000006025	annotation not available	Ring-box 1.	0.928
ENSCAPP00000003757	APBB3	ENSCAPP00000003757	ENSCAPP00000002234	annotation not available	Amyloid beta precursor protein binding family B member 3.	0.449
ENSCAPP00000003757	BACH1	ENSCAPP00000003757	ENSCAPP00000004087	annotation not available	BTB domain and CNC homolog 1.	0.985
ENSCAPP00000003757	ENSCAPP00000003806	ENSCAPP00000003757	ENSCAPP00000003806	annotation not available	annotation not available	0.868