Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM10Tripartite motif containing 10. (341 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 0.953
TRIM35
Tripartite motif containing 35.
    
 
 0.903
TTC23
Tetratricopeptide repeat domain 23.
    
   0.793
ZMYM2
Zinc finger MYM-type containing 2.
    
  0.704
ANKRD11
Ankyrin repeat domain 11.
    
 0.699
KLHL41
Kelch like family member 41.
    
   0.695
ENSCAPP00000007707
annotation not available
    
  0.657
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
   
 0.645
MOG
Myelin oligodendrocyte glycoprotein.
  
 
 
 0.632
TBK1
TANK binding kinase 1.
    
 0.625
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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