STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HS3ST1Heparan sulfate-glucosamine 3-sulfotransferase 1. (225 aa)    
Predicted Functional Partners:
SERPINC1
Serpin family C member 1.
      
 0.547
GPC3
Glypican 3.
     
 0.536
NAA25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
      
 0.518
GPC4
Glypican 4.
     
 0.515
SDC1
Syndecan 1.
     
 0.514
ENSCAPP00000002179
annotation not available
     
 0.498
ENSCAPP00000004695
annotation not available
     
 0.498
GPC1
Glypican 1.
     
 0.498
ENSCAPP00000015376
annotation not available
     
 0.498
SDC3
Syndecan 3.
     
 0.491
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.