STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPP2Tripeptidyl peptidase 2. (1199 aa)    
Predicted Functional Partners:
POLB
DNA polymerase beta.
    
   0.958
ZRANB1
Zinc finger RANBP2-type containing 1.
    
   0.785
POLL
DNA polymerase lambda.
    
   0.778
ERAP1
Endoplasmic reticulum aminopeptidase 1.
  
 
 0.752
ENSCAPP00000012685
annotation not available
   
   0.729
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
    0.656
DOK3
Docking protein 3.
    
   0.652
PPP1R16A
Protein phosphatase 1 regulatory subunit 16A.
  
   0.625
LNPEP
Leucyl and cystinyl aminopeptidase.
  
 
 0.620
ENSCAPP00000006041
annotation not available
     
 0.605
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.