STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL6Oxysterol binding protein like 6. (844 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 
 0.964
OSBPL3
Oxysterol binding protein like 3.
    
   0.868
VAPA
VAMP associated protein A.
    
 
 0.843
AGBL5
ATP/GTP binding protein like 5.
      
 0.807
DNPEP
Aspartyl aminopeptidase.
      
 0.789
CASP9
Caspase 9.
      
 0.760
APAF1
Apoptotic peptidase activating factor 1.
      
 0.760
NCAPH2
non-SMC condensin II complex subunit H2.
      
 0.755
ABCA12
ATP binding cassette subfamily A member 12.
      
 0.688
EVA1A
Eva-1 homolog A, regulator of programmed cell death.
      
 0.686
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.