Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOFOtoferlin. (1993 aa)    
Predicted Functional Partners:
ENSCAPP00000017964
annotation not available
    
 
 0.952
CLCA2
Chloride channel accessory 2.
    
 
 0.892
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.824
CLIC5
Chloride intracellular channel 5.
      
 0.823
ENSCAPP00000017768
annotation not available
      
 0.812
ENSCAPP00000004359
annotation not available
      
 0.797
SLC17A8
Solute carrier family 17 member 8.
   
 
 0.793
ENSCAPP00000007369
annotation not available
     
 0.754
ENSCAPP00000005959
annotation not available
     
 0.711
CAV3
Caveolin 3.
    
 0.692
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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