ENSCAPP00000004138 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCAPP00000004138

annotation not available (393 aa)

Predicted Functional Partners:

ZPLD1

0.568

COL6A2

0.557

ICE2

0.487

LRFN5

0.454

FRMD8

0.454

FANK1

0.454

ENSCAPP00000012204

0.450

SNX7

0.449

AIG1

0.448

ENSCAPP00000002788

0.446

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIG1	ENSCAPP00000004138	ENSCAPP00000013972	ENSCAPP00000004138	Androgen induced 1.	annotation not available	0.448
COL6A2	ENSCAPP00000004138	ENSCAPP00000002995	ENSCAPP00000004138	Collagen type VI alpha 2 chain.	annotation not available	0.557
ENSCAPP00000002788	ENSCAPP00000004138	ENSCAPP00000002788	ENSCAPP00000004138	annotation not available	annotation not available	0.446
ENSCAPP00000004138	AIG1	ENSCAPP00000004138	ENSCAPP00000013972	annotation not available	Androgen induced 1.	0.448
ENSCAPP00000004138	COL6A2	ENSCAPP00000004138	ENSCAPP00000002995	annotation not available	Collagen type VI alpha 2 chain.	0.557
ENSCAPP00000004138	ENSCAPP00000002788	ENSCAPP00000004138	ENSCAPP00000002788	annotation not available	annotation not available	0.446
ENSCAPP00000004138	ENSCAPP00000012204	ENSCAPP00000004138	ENSCAPP00000012204	annotation not available	annotation not available	0.450
ENSCAPP00000004138	FANK1	ENSCAPP00000004138	ENSCAPP00000017398	annotation not available	Fibronectin type III and ankyrin repeat domains 1.	0.454
ENSCAPP00000004138	FRMD8	ENSCAPP00000004138	ENSCAPP00000004311	annotation not available	FERM domain containing 8.	0.454
ENSCAPP00000004138	ICE2	ENSCAPP00000004138	ENSCAPP00000007527	annotation not available	Interactor of little elongation complex ELL subunit 2.	0.487
ENSCAPP00000004138	LRFN5	ENSCAPP00000004138	ENSCAPP00000003330	annotation not available	Leucine rich repeat and fibronectin type III domain containing 5.	0.454
ENSCAPP00000004138	SNX7	ENSCAPP00000004138	ENSCAPP00000016844	annotation not available	Sorting nexin 7.	0.449
ENSCAPP00000004138	ZPLD1	ENSCAPP00000004138	ENSCAPP00000000809	annotation not available	Zona pellucida like domain containing 1.	0.568
ENSCAPP00000012204	ENSCAPP00000004138	ENSCAPP00000012204	ENSCAPP00000004138	annotation not available	annotation not available	0.450
FANK1	ENSCAPP00000004138	ENSCAPP00000017398	ENSCAPP00000004138	Fibronectin type III and ankyrin repeat domains 1.	annotation not available	0.454
FRMD8	ENSCAPP00000004138	ENSCAPP00000004311	ENSCAPP00000004138	FERM domain containing 8.	annotation not available	0.454
ICE2	ENSCAPP00000004138	ENSCAPP00000007527	ENSCAPP00000004138	Interactor of little elongation complex ELL subunit 2.	annotation not available	0.487
LRFN5	ENSCAPP00000004138	ENSCAPP00000003330	ENSCAPP00000004138	Leucine rich repeat and fibronectin type III domain containing 5.	annotation not available	0.454
SNX7	ENSCAPP00000004138	ENSCAPP00000016844	ENSCAPP00000004138	Sorting nexin 7.	annotation not available	0.449
ZPLD1	ENSCAPP00000004138	ENSCAPP00000000809	ENSCAPP00000004138	Zona pellucida like domain containing 1.	annotation not available	0.568