Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004144annotation not available (173 aa)    
Predicted Functional Partners:
DESI1
Desumoylating isopeptidase 1.
    
   0.959
PSEN1
Presenilin 1.
    
 
 0.939
BAX
BCL2 associated X, apoptosis regulator.
    
 0.928
BAK1
BCL2 antagonist/killer 1.
    
 0.867
PSEN2
Presenilin 2.
    
 
 0.863
GUK1
Guanylate kinase 1.
   
   0.825
PHB2
Prohibitin 2.
    
 
 0.717
ENSCAPP00000018403
annotation not available
   
  
 0.698
DESI2
Desumoylating isopeptidase 2.
    
   0.691
ANTXR1
ANTXR cell adhesion molecule 1.
      
 0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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