STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004150annotation not available (230 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.989
TAF9
TATA-box binding protein associated factor 9.
    
 0.988
TAF12
TATA-box binding protein associated factor 12.
    
 0.988
TAF6
TATA-box binding protein associated factor 6.
   
 0.988
SGF29
SAGA complex associated factor 29.
    
 0.987
ENSCAPP00000007075
annotation not available
    
 0.987
TADA3
Transcriptional adaptor 3.
    
 0.987
USP22
Ubiquitin specific peptidase 22.
    
 0.986
ACTL6A
Actin like 6A.
    
 0.986
MEAF6
MYST/Esa1 associated factor 6.
    
 0.986
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.