Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIBC2RIB43A domain with coiled-coils 2. (255 aa)    
Predicted Functional Partners:
EFHC1
EF-hand domain containing 1.
   
 
 0.980
TEKT2
Tektin 2.
   
 
 0.979
TEKT3
Tektin 3.
   
 
 0.961
NME7
NME/NM23 family member 7.
    
 
 0.958
FAM183A
Family with sequence similarity 183 member A.
    
 
 0.958
ENSCAPP00000015156
annotation not available
   
 
 0.955
MNS1
Meiosis specific nuclear structural 1.
   
 0.951
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.951
ENSCAPP00000000406
annotation not available
   
 
 0.945
TTC29
Tetratricopeptide repeat domain 29.
   
 
 0.945
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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