STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIBC2RIB43A domain with coiled-coils 2. (255 aa)    
Predicted Functional Partners:
EFHC1
EF-hand domain containing 1.
   
 
 0.915
TEKT2
Tektin 2.
   
 
 0.890
TEKT3
Tektin 3.
   
 
 0.883
MNS1
Meiosis specific nuclear structural 1.
    
 
 0.859
ENSCAPP00000000406
annotation not available
   
 
 0.845
CFAP45
Cilia and flagella associated protein 45.
   
 0.843
TEKT1
Tektin 1.
   
 
 0.841
PACRG
Parkin coregulated.
   
 
 0.827
CCDC173
Coiled-coil domain containing 173.
    
  0.822
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.820
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.