STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAP1Transporter 1, ATP binding cassette subfamily B member. (568 aa)    
Predicted Functional Partners:
ENSCAPP00000005172
annotation not available
  
0.999
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.961
PSMB9
Proteasome 20S subunit beta 9.
 
 
 0.953
CALR
Calreticulin.
    
 0.946
PSMB8
Proteasome 20S subunit beta 8.
 
 
 0.911
ENSCAPP00000007150
annotation not available
    
 0.886
ABCB9
ATP binding cassette subfamily B member 9.
  
  
 
0.851
IRF1
Interferon regulatory factor 1.
   
  
 0.759
STAT1
Signal transducer and activator of transcription 1.
   
  
 0.701
NLRC5
NLR family CARD domain containing 5.
   
  
 0.696
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.