STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEIOCMeiosis specific with coiled-coil domain. (874 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 
 0.678
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.558
REC8
REC8 meiotic recombination protein.
     
 0.522
RAD21L1
RAD21 cohesin complex component like 1.
     
 0.473
RAD21
RAD21 cohesin complex component.
     
 0.473
SMC1B
Structural maintenance of chromosomes 1B.
      
 0.438
YTHDC1
YTH domain containing 1.
    
 
 0.422
ENSCAPP00000002117
annotation not available
    
 
 0.410
ARHGAP42
Rho GTPase activating protein 42.
      
 0.406
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.