STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNProstaglandin F2 receptor inhibitor. (866 aa)    
Predicted Functional Partners:
CD9
CD9 molecule.
    
 
 0.913
ENSCAPP00000005186
annotation not available
    
 
 0.886
ENSCAPP00000005861
annotation not available
    
 
 0.760
CD151
CD151 molecule (Raph blood group).
    
 
 0.708
TSPAN3
Tetraspanin 3.
    
 
 0.593
TSPAN8
Tetraspanin 8.
    
 
 0.587
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.555
TSPAN33
Tetraspanin 33.
    
 
 0.530
ENSCAPP00000010388
annotation not available
    
 
 0.530
TSPAN15
Tetraspanin 15.
    
 
 0.530
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.