Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNProstaglandin F2 receptor inhibitor. (866 aa)    
Predicted Functional Partners:
CD9
CD9 molecule.
    
 
 0.986
ENSCAPP00000005186
annotation not available
    
 
 0.986
CD151
CD151 molecule (Raph blood group).
    
 
 0.925
ENSCAPP00000005861
annotation not available
    
 
 0.906
TSPAN2
Tetraspanin 2.
    
 
 0.840
TSPAN11
Tetraspanin 11.
    
 
 0.721
PTGFR
Prostaglandin F receptor.
      
 0.660
GDAP2
Ganglioside induced differentiation associated protein 2.
      
 0.628
WDR3
WD repeat domain 3.
      
 0.571
SDCBP
Syndecan binding protein.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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