STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFPL1Zinc finger protein like 1. (281 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 
 0.928
ACBD5
acyl-CoA binding domain containing 5.
    
   0.913
OSBPL2
Oxysterol binding protein like 2.
    
   0.799
VAPB
VAMP associated protein B and C.
    
 
 0.785
PITPNM3
PITPNM family member 3.
    
 
 0.776
ENSCAPP00000003514
annotation not available
    
 
 0.761
COPG1
Coatomer protein complex subunit gamma 1.
   
  
 0.698
TM9SF3
Transmembrane 9 superfamily member 3.
      
 0.689
TMF1
TATA element modulatory factor 1.
      
 0.677
FAM91A1
Family with sequence similarity 91 member A1.
      
 0.676
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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